[front page] [about] [programs] [databases] [complete genomes] [dna correlations] [mirror] 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998 | 1997 | 1996 | 1995 | 1994 | 1993 | 1992 | 1991 | 1990 | 1989 | 1988 | 1987 | 1986 | 1985 | 1984 | 1983 | 1982 | 1981 | 1980 | pre-1980 |

1995

Some poster presentations at the Intelligen Systems for Molecular Biology'95 (Cambridge, UK, July 16-19, 1995)

1. Pierre Baldi, Søren Brunak, Yves Chauvin, Jacob Engelbrecht, Anders Krogh (1995), "Periodic sequence patterns in human exons", Proceedings of the third international conference on Intelligent Systems for Molecular Biology (AAAI Press), pp.30-38.
   [ PDF ]

2. Susan M Berget (1995), "Exon recognition in vertebrate splicing", Journal of Biological Chemistry, 270(6):2411-2414.
   [html]

3. MY Borodovsky, JD McIninch, EV Koonin, KE Rudd, C Medigue, A Danchin (1995), "Detection of new genes in a bacterial genome using Markov models for three gene classes", Nucleic Acids Research, 23: 3554-3562.
   [ abstract]

4. promoter/TF

   QK Chen, GZ Hertz, G Stormo (1995), "MATRIX SEARCH 1.0: a computer program that scans DNA sequences for transcriptional elements using a database of weight matrices", Computer Applications in Biosciences, 11: 563-566.

5. JW Fickett (1995), "ORFs and genes: How strong a connection?", Journal of Computational Biology, 2(1): 117-123. [ abstract]

6. JW Fickett, R Guigo (1995), "Computational gene identification," in Internet for the Molecular Biologist , ed. S Swindell.

7. YM Fraenkel, Y Mandel, D Friedberg, H Margalit (1995), "Identification of common motifs in unaligned DNA sequences: application to Escherichia coli Lrp regulon", Computer Applications in Biosciences, 11:379-387.

8. MS Gelfand(1995), "Prediction of function in DNA sequence analysis", Journal of Computational Biology, 2(1):87-117.
   [ abstract] [ Medline entry]
   [supplement materials: http://www.eimb.relarn.ru/gelfand/fans-ref.html (a bibliography named FANS-REF. release 11.2 (1996)).
   here .] updated on May 1997: http://hto-13.usc.edu/software/procrustes/fans_ref/fans-ref.dat (datafile: release 12.1 (1997))

9. R Guigo, JW Fickett (1995) , "Distinctive sequence features in protein coding, non-coding, and intergenic human DNA", Journal of Molecular Biology, 253:51-60. [ abstract] [ Medline entry]

10. A Kamb, C Wang, A Thomas, BS DeHoff, FH Norris, K Richardson, J Rine, M Skolnick, PR Rosteck Jr. (1995), "Software trapping: a strategy for finding genes in large genomic regions", Computers and Biomedical Research, 28(2):140-153.
    [ abstract]

11. promoter/TF

    OV Kel, AG Romachenko, AE Kel, A Naumochkin, NA Kolchanov (1995), "Structure of data representation in TRRD - database of transcription regulatory regions on eukaryotic genomes", Proceedings of the 28th Hawaii International Conference on System Sciences, eds.?, pp.?-?.

12. promoter/TF

    YV Kondrakhin, AE Kel, NA Kolchanov, AG Romashchenko (1995), "Eukaryotic promoter recognition by binding sites for transcription factors", Computer Applications in Biosciences, 11, 477-488.

13. Marilyn Kozak (1995), "Adherence to the first-AUG rule when a second AUG codon follows closely upon the first", Proceedings of the National Academy of Sciences, 92:2662-2666.

14. promoter/TF

    Niels I Larsen, Jacob Engelbrecht, Søren Brunak (1995), "Analysis of eukaryotic promoter sequences reveals a systematically occurring CT-signal", Nucleic Acids Research, 23(7), 1223-1230.
    [abstract]

15. promoter/TF

    DS Prestridge (1995), "Predicting Pol II promoter sequence using transcription factor binding sites", Journal of Molecular Biology, 249:923-932. [ Medline entry]

16. splicing

    BVB Reddy, MW Pandit (1995), "A statistical analytical approach to decipher information from biological sequences: Application to murine splice-site analysis and prediction", Journal of Biomolecular Structure and Dynamics, 12:785-801.

17. S Salzberg (1995), "Locating protein coding regions in human DNA using a decision tree algorithm", Journal of Computational Biology, 2(3): 473-486.

18. P Senapathy (1995), "Introns and the origin of protein-coding genes", Science, 268: 1366-1367.

19. EE Snyder, GD Stormo (1995), "Identification of protein coding regions in genomic DNA", Journal of Molecular Biology, 248: 1-18.
    [abstract]
    [supplement material: http://beagle.colorado.edu/~eesnyder/GeneParser.html (GENEPARSER)]

20. VV Solovyev, AA Salamov, CB Lawrence (1995), "Prediction of human gene structure using linear discriminant functions and dynamic programming", Proceedings of the first international conference on Intelligent Systems for Molecular Biology (AAAI Press), pp.367-375.
    [abstract] [ Medline entry]
    [supplement material: http://dot.imgen.bcm.tmc.edu:9331/gene-finder/gf.html (BCM Genefinder)]