Bibliography on
Microarray Data Analysis

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© Copyright, 1999-2009 Wentian Li
of North Shore LIJ Research Institute

http://www.nslij-genetics.org/microarray/
1998

  1. Cheung VG, Gregg JP, Gogolin-Ewens KJ, Bandong J, Stanley CA, Baker L, Higgins MJ, Nowak NJ, Shows TB, Ewens WJ, Nelson SF, Spielman RS (1998), "Linkage-disequilibrium mapping without genotyping", Nature Genetics, 18(3):225-230.
    [abstract(Medline)]

  2. MB Eisen, PT Spellman, PO Brown, D Botstein (1998), "Cluster analysis and display of genome-wide expression patterns", Proceedings of the National Academy of Sciences, 95(25):14863-14868.
    [abstract(Medline)] [ webpage from the authors: rana.lbl.gov ]

  3. database
    O Ermolaeva, M Rastogi, KD Pruitt, GD Schuler, ML Bittner, Y Chen, R Simon, P Meltzer, JM Trent, MS Boguski (1998), "Data management and analysis for gene expression arrays", Nature Genetics, 20(1):19-23.
    [abstract(Medline)] [ webpage from the authors: research.nhgri.nih.gov/microarray/ ]

  4. review
    P Fortina (1998), "Applications of emerging technologies to the study of human genetics", European Journal of Human Genetics, 6(1):2-3.

  5. review
    JG Hacia, LC Brody, FS Collins (1998), "Applications of DNA chips for genomic analysis", Molecular Psychiatry, 3(6):483-492.
    [abstract(Medline)]

  6. application
    JG Hacia , B Sun , N Hunt , K Edgemon , D Mosbrook , C Robbins , SP Fodor, DA Tagle, FS Collins (1998), "Strategies for mutational analysis of the large multiexon ATM gene using high-density oligonucleotide arrays", Genome Research, 8(12):1245-1258.
    [abstract(Medline)]

  7. application
    D Kosman, J Reinitz, DH Sharp (1998), "Automated assay of gene expression at cellular resolution", Biocomputing'98: Proceedings of the Pacific Symposium, 3:?-?.
    [PDF]

  8. networks
    S Liang, S Fuhrman, R Somogyi (1998), "REVEAL, A general reverse engineering algorithm for inference of genetic network architectures", Biocomputing'98: Proceedings of the Pacific Symposium, 3:?-?.
    [PDF]

  9. SE McKenzie, E Mansfield, E Rappaport, S Surrey, P Fortina (1998) "Parallel molecular genetic analysis", European Journal of Human Genetics, 6(5):417-429.
    [abstract(Medline)]

  10. GS Michaels, DB Carr, M Askenazi, S Fuhrman, X Wen, R Somogyi (1998) "Cluster analysis and data visualization of large-scale gene expression data", Biocomputing'98: Proceedings of the Pacific Symposium, 3:?-?.
    [PDF]

  11. review
    G Ramsay (1998), "DNA chips: state-of-the art", Nature Biotechnology, 16(1):40-41.
    [abstract(Medline)]

  12. M Schena, RA Heller, TP Theriault, K Konrad , E Lachenmeier, RW Davis (1998), "Microarrays: biotechnology's discovery platform for functional genomics", Trends in Biotechnology, 16(7):301-306.
    [abstract(Medline)]

  13. review
    D Shalon (1998), "Gene expression micro-arrays: a new tool for genomic research", Pathol Biol (Paris), 46(2):107-109.
    [abstract(Medline)]

  14. application
    PT Spellman, G Sherlock, MQ Zhang, VR Iyer, K Anders, MB Eisen, PO Brown, D Botstein, B Futcher (1998), "Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization", Molecular Biology of the Cell, 9:3273-3297.
    [html]

  15. networks
    D Thieffry, R Thomas (1998), "Qualitative analysis of gene networks", Biocomputing'98: Proceedings of the Pacific Symposium, 3:?-?.
    [PDF]

  16. A Watson, A Mazumder, M Stewart, S Balasubramanian (1998), "Technology for microarray analysis of gene expression", Current Opinion in Biotechnology, 9(6):609-614.
    [abstract(Medline)] [PDF]

  17. application
    X Wen, S Fuhrmanm, GS Michaels, DB Carr, S Smith, JL Barker, R Somogyi (1998), "Large-scale temporal gene expression mapping of CNS development", Proceedings of the National Academy of Sciences, 95:334-339.

  18. networks
    A Wuensche (1998), "Genomic regulation modeled as a network with basins of attraction", Biocomputing'98: Proceedings of the Pacific Symposium, 3:?-?.
1998