1.
data preparation commands

LOAD MARKERS
USE

2.
mapping commands

SCAN PEDIGREES
TOTAL STAT
SINGLE POINT
COUNT RECS
HAPLOTYPE
DISCARD
MAX BITS (mb)
SKIP LARGE
ANALYSIS
SCORE
POSTSCRIPT OUTPUT (ps)
LETTERS
DRAWING SCALE (ds)
OFF END
INCREMENT
MAP FUNCTION
UNITS
DISPLAY SCORES

3.
sibs qualitative trait mapping commands

ESTIMATE
EXCLUDE

4.
sibs quantitative trait loci (qtl) mapping commands

HASEMAN ELSTON
ML VARIANCE
NO DOM VAR
NONPARAMETRIC

5.
other sibs commands

PAIRS USED
DUMP IBD

6.
variance components

VARIANCE COMPONENTS
SET STARTING VALUES
MEANS BY SEX

7.
tdt commands

TDT | TDT2 | TDT3
TDT4 | PERM1 | PERM2

8.
additional commands

HELP | PHOTO
RUN | SYSTEM
CHANGE DIRECTORY (cd)
TIME | QUIT (q)


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