new linkage software (2008-now)

An Alphabetic List
of
Genetic Analysis Software
WHAT'S NEW

(2008-now)

02/19/2010
SNPHARVESTER: detecting epistatic interactions
02/11/2010
BEAM : Bayesian Epistasis Association Mapping
10/14/2009
SNIPPEEP : graphic interface to whole genome genotyping
ASSOCIATIONVIEWER: display SNP in a genetic context
10/09/2009
SNPFILE : a library and API for manipulating large SNP datasets
10/06/2009
CHIP2SPELL
HAPLOPOOL
IGG: integrate genotype for genetic studies
TAGSTER
09/30/2009
FEST
HAPLOWSER
PATH
09/08/2009
EAGLET : Efficient Analysis of Genetic Linkage -- Testing and Estimation
HAPMINER : mining the haplotypes by density-based clustering algorithm
MDR : multifactor dimensionality reduction
MDR-PDT : multifactor dimensionality reduction and pedigree disequilibrium test
GENOMESIMLA : generating data-sets with realistic LD patterns.
MECPM : Maximum Entropy Conditional Probability Moldeling
05/15/2009
PROC QTL : SAS procedure for mapping QTL
04/30/2009
GWAVA has been retired to the obsolete list.
03/05/2009
QMSIM : simulation of genetic architectures and population structures in livestock