Presentations (Wentian Li)


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100 human genes
2005 Mexico course on genetic association analysis
Perl code for recursive segmentation of DNA sequences
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  • On acceleration of major transitions in evolution (talk, Shanghai Jiao Tong University, Center for Systems Biomedicine, Shanghai, China, July 2010)

  • On acceleration of major transitions in evolution (talk, Workshop on Evolutionary Theory, Cuernavaca, Mexico, August 2009) [powerpoint]

  • Partial correlation analysis indicates causal relationships between GC-content, exon density and recombination rate variation in the human genome
    (talk, APBC'09, Beijing, China, January 2009)

  • Detection of regions with copy-number-variation or copy-number-alteration by cumulative plots
    (talk, APBC'09, Beijing, China, January 2009)

  • Genetic diagnosis: are we there yet?
    (talk, Feinstein Institute for Medical Research, December 2008) [powerpoint]

  • Copy number variation: a new type of genetic marker in whole-genome association studies
    (talk, Northwestern University, October 2008) [powerpoint]

  • Partial correlation analysis indicates causal relationships between GC-content, exon density and recombination rate variation in the human (co-authors: Jan Freudenberg, Mingyi Wang, Yaning Yang)
    (poster, Feinstein Institute for Medical Research retreat, September 2008)

  • Population genomic analysis of the human extended MHC region (co-authors: Jan Freudenberg, Peter K Gregersen)
    (poster, Feinstein Institute for Medical Research retreat, September 2008)

  • Selecting the disease causing polymorphism among several disease-associated SNPs that are in strong linkage disequilibrium (co-authors: Elaine F Remmers, Peter K Gregersen)
    (poster, Feinstein Institute for Medical Research retreat, September 2008)

  • Detection of regions with copy-number-variation or copy-number-alteration by cumulative plots (co-aothors: Annette Lee, Nicholas Chiorazzi, Peter K gregersen)
    (poster, Feinstein Institute for Medical Research retreat, September 2008)

  • Selecting the more powerful tests in genetic associatin studies using phase diagram
    (talk, Department of Epidemiology and Population Health, Albert Einstein College of Medicine, December 2007)

  • Possible age-effects on gene expression in normal samples (poster, Feinstein Institute for Medical Research retreat, September 2007)

  • Two new concepts in single-marker case-control genetic association tests: fractional degrees of freedom and phase diagram (poster, Feinstein Institute for Medical Research retreat, September 2007)

  • Causal Inference in Genetics
    (talk, NSF Sponsored International Conference on Bioinformatics, Hangzhou, China, Jun 2007) [powerpoint]

  • Genotype-based case-control analysis, violation of Hardy-Weinberg equilibrium, and phase diagram (talk, co-author Young Ju Suh) (APBC'07, Hong Kong, China, January 2007)

  • Using pedigree founders only or using all pedigree members? -- A comparison of SNP-expression regression results, (co-authors: YJ Suh, HS Lee, F Batliwalla)
    (poster, Genetic Analysis Workshop 15, St. Pete Beach, FL, November 2006) [PDF]

  • Genotype-based case-control analysis, violation of Hardy-Weinberg equilibrium, and phase diagrams (poster, North Shore LIJ retreat, October 2006) [PDF]

  • Inferring causal relationships among intermediate phenotypes and biomarkers: a case study of rheumatoid arthritis (poster, North Shore LIJ retreat, October 2006) [PDF]

  • Causal Inference for Genetic and Microarray Data
    (talk, International Workshop on Exploring the Mechanisms and Landscapes of Cellular Networks, Telluride, CO, August 2006)

  • Causal Inference of Intermediate Phenotypes and Biomarkers in Rheumatoid Arthritis: An Application of Machine Learning Techniques in Genetic Epidemiology
    (talk, Fuwai Hospital/Chinese National Human Genome Ceneter, Beijing, China, May 2006) [MS PowerPoint]

  • A Study of 500kb Oscillation of GC% in Human Chromosome 21
    (talk, Center for Theoretical Biology, Beijing University, Beijing, China, May 2006)

  • Ohno's Evolution by Duplication and DNA Correlation
    (talk, Institute of Botany, Chinese Academy of Science, Beijing, China, May 2006)

  • A Study of 500kb Oscillation of GC% in Human Chromosome 21
    (talk, Institute of Biophysics, Hebei University of Technology, Tianjing, China, May 2006)

  • "The less, the better": another trend in genomic and genetic analysis
    (talk, Hersey Computational Biology and Bioinformatics Seminar, Cold Spring Harbor Lab, Feb 2006) [powerpoint]

  • Universal 1/f spectra in DNA sequences (talk, Universaity of Central Florida, December 2005) [PDF]

  • The 500kb Oscillation of GC% and Its Possible Connection to Down Syndrome (talk, 6th Anton Dohrn Workshop on Evolutionary Genomics, Ischia, Naples, November 2005) [PDF]

  • Effective Sample Size of Affected Sib Pairs in Case-Control Analyses
    (poster, North Shore LIJ retreat, September 2005) [PDF]

  • "The More, The Better" or "The Less, The Better"? Conflicting Trends in Genomic and Genetic Analysis
    (talk, Department of Biomathematics, Mt. Sinai School of Medicine, May 2005) [power-point]

  • Ohno's evolution by duplication and DNA correlations
    (talk, Instituto de Investigaciones Biomedicas, Universidad Nacional Autonoma de Mexico, March 2005) [MS PowerPoint]

  • Association studies to locate human disease genes
    (talk, Symposium on pharmacogenomics, Guadalajara, Mexico, March 2005). [MS PowerPoint]

  • Some Recent Progresses in Genome-Wide DNA Sequence Analysis
    (talk, Instituto de Fisica, Universidad Nacional Autonoma de Mexico, November 2004) [PDF]

  • 1/f Spectrum is a Universal Feature of Human Genome DNA Sequences
    (talk, Texas A&M, April 2004) [PDF]

  • Computer reconstructed haplotypes in pedigrees may not be trusted
    (poster, North Shore LIJ retreat, May 2003) [PDF]

  • Gene Selection Criterion for Discriminant Microarray Data Analysis Based on Extreme Value Distributions
    (talk, International Conference on Research in Computational Molecular Biology (RECOMB'2003, Berlin, April 2003) [PDF] [citation via google]

  • Zipf's Law in Importance of Genes for Cancer Classification Using Microarray Data
    (talk, Second Conference of Chinese Bioinformatics Society, Beijing, China, July 2002) [PDF] (almost identical with my Barcelona talk)

  • Introduction to Microarray Data Analysis (talk, pre-CCB02 course, Beijing, China, June 2002) [PDF]

  • Statistical Properties of Human Isochore Sequences
    (talk, International Workshop on Molecular Evolution, Beijing, June 2002)

  • Zipf's Law in Importance of Genes for Cancer Classification Using Microarray Data
    (talk, UPF/IMIM, Barcelona, Spain, April 2002) [PDF]

  • Are Spectral Analyses Useful for DNA Sequence Analysis?
    (talk, International Conference on DNA in Chromatin, Arcachon, France, March 2002) [PDF]

  • Low- and High-Level Analysis of Affymetrix Chip Data
    (talk, Pharmacia Research Center, Nerviano/Milano, November 2001) [PDF]

  • Five Applications of Recursive Segmentation in DNA Sequence Analysis
    (talk, Istituto Superiore di Sanita, Roma, October 2001) [PDF]

  • Are Isochore Sequences Homogeneous?
    (talk, 5th Anton Dohrn Workshop on Natural Selection and the Neutral Theory, Ischia, Naples, October 2001) [PDF]

  • DNA Segmentation as a Model Selection Process
    (talk, International Conference on Research in Computational Molecular Biology'2001, April 2001) [MS PowerPoint]

  • Gene Selection in Discriminant Microarray Data Analysis
    (talk, Department of Physiology and Biophysics Seminar, Albert Einstein College of Medicine, April 2001) [MS PowerPoint]

  • How Many Genes Are Needed for a Discriminant Microarray Data Analysis?
    (talk, Critical Assessment of Techniques for Microarray Data Mining Workshop, December 2000) [PDF]

  • Applications of Akaike and Bayesian Information Criteria in Epidemiology, Linkage analysis, Microarray Data Analysis, and DNA Sequence Analysis
    (talk, Genetic Epidemiology Seminar, Columbia University, December 2000) [PDF]

  • Reducing Complexity in Biological and Genetic Data
    (talk, Medical Informatics Seminar, Columbia University, November 2000) [PDF]

  • Selecting Mathematical Models of DNA Sequences by Akaike Information Criterion
    (talk, Center for Bioinformatics, Beijing University, July 2000) [PDF ]

  • Applying Artificial Neural Networks in Pedigree Analysis of Complex Genetic Diseases
    (talk, Beijing Bioinformatics Workshop, July 1999) [PDF]

  • Correlations, Domains, and Periodicities in DNA Sequences
    (talk, Beijing Bioinformatics Workshop, July 1999) [PDF]

  • A Revised Li-Sacks Formula For Calculating the Probability of Identity-by-Descent Proportion
    (poster, Annual Meeting of American Society of Human Genetics, Denver CO, Oct 1998) [PDF]