Bibliography: Linkage Disequilibrium Analysis

number of visitors to the front page since October 13, 2003:
number of papers included ~1660 (up 1170 from 450, the number at the old RU site)
Last update: April 14, 2008.

This page was previous located at the Lab of Statistical Genetics of Rockefeller University, and is moved to the current location at Feinstein Institute for Medical Research, North Shore LIJ Health System in 2003. It is maintained by Dr. Wentian Li.

population-structure

TDT

quantitative-trait

haplotype-block

applications

These sites are of potential interests for people carrying out LD analysis:

A comprehensive list of linkage programs (programs) http://www.nslij-genetics.org/soft/
AFFRED (allele frequency database) (database) http://alfred.med.yale.edu/alfred/
db GaP (database of Genotype and Phenotype) : (database) http://www.ncbi.nlm.nih.gov/sites/entrez?db=gap
db SNP : (database) http://www.ncbi.nlm.nih.gov/SNP/
Genetic Association Database http://geneticassociationdb.nih.gov/
Entrez Gene (database) http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene
Frequency Finder http://bluegenes.bsd.uchicago.edu/frequencyfinder/
Genome News Network (news & education) http://www.genomenewsnetwork.org/
HAPMAP (database) http://www.hapmap.org/
Human Gene Mutation Database (HGMD) (database) http://www.hgmd.org/
Human Genome Variation database (HGVbase) (database) http://hgvbase.cgb.ki.se/
Human Genome Variation Society (society) http://www.genomic.unimelb.edu.au/mdi/
Human Genome Epidemiology Network: (database) http://www.cdc.gov/genomics/hugenet/default.htm
MEDLINE search: (literature) http://www.nslij-genetics.org/search_pubmed.html
Nickerson's lab (database) http://droog.mbt.washington.edu/
OMIM: (human disease database) http://www3.ncbi.nlm.nih.gov/Omim/
Some linkage disequilibrium software (programs): http://bioinformatics.well.ox.ac.uk/~lon/ldsoftware/srcindex.html
variome.net (database) http://variome.net/index.php

WWW http://www.nslij-genetics.org