Bibliography: Linkage Disequilibrium Analysis

number of visitors to the front page since October 13, 2003:
number of papers included ~1850 (up 1400 from 450, the number at the old RU site)
Last update: November 03, 2008.

This page was previous located at the Lab of Statistical Genetics of Rockefeller University, and is moved to the current location at Feinstein Institute for Medical Research, North Shore LIJ Health System in 2003. It is maintained by Dr. Wentian Li.

population-structure

TDT

quantitative-trait

haplotype-block

applications

These sites are of potential interests for people carrying out LD analysis:

A catalog of published genome-wide association studies http://www.genome.gov/gwastudies/
A comprehensive list of linkage programs (programs) http://www.nslij-genetics.org/soft/
Allele frequency database (AFFRED) (database) http://alfred.med.yale.edu/alfred/
db GaP (database of Genotype and Phenotype) : (database) http://www.ncbi.nlm.nih.gov/sites/entrez?db=gap
db SNP : (database) http://www.ncbi.nlm.nih.gov/SNP/
Entrez Gene (database) http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene
Frequency Finder http://bluegenes.bsd.uchicago.edu/frequencyfinder/
Genetic Association Database http://geneticassociationdb.nih.gov/
Genetic Association Information Network (GAIN): http://www.genome.gov/19518664
Genome News Network (news & education) http://www.genomenewsnetwork.org/
HAPMAP (database) http://www.hapmap.org/
Human Gene Mutation Database (HGMD) (database) http://www.hgmd.org/
Human Genome Variation database (HGVbase) (database) http://www.hgvbaseg2p.org/
Human Genome Variation Society (society) http://www.hgvs.org/
Human Genome Epidemiology Network: (database) http://www.cdc.gov/genomics/hugenet/default.htm
Human Variome Porject: http://www.humanvariomeproject.org/
MEDLINE search: (literature) http://www.nslij-genetics.org/search_pubmed.html
Nickerson's lab (database) http://droog.mbt.washington.edu/
OMIM: (human disease database) http://www.ncbi.nlm.nih.gov/sites/entrez?db=omim
Public Population Project in Genomics (P3G): http://www.p3gconsortium.org/
SNPedia: http://www.snpedia.com/
variome.net (database) http://variome.net/index.php

WWW http://www.nslij-genetics.org